species:   Artha
pid:       MI0005439
parent:    ath-MIR862
paralog:   
locus:     2:10718096-10718198
matures:   ['UCCAAUAGGUCGAGCAUGUGC', 'AUAUGCUGGAUCUACUUGAAG']
srr:       SRR9216050
genome:    /Users/jax/+Genomes/Plant_genomes/Artha.TAIR10_chr_all.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216050.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216050.cram 2:10718096-10718198

0 out of bounds
3 alignments
3 proper strand
1 stranded perfect matches

 **********************                                                         ********************** 
ACAGUAGUUUUCCAAUAGGUCGAGCAUGUGCUGAAACUGUGUGUACAGAGUUCUCAUAAACACACAGUUUCAGCAUAUGCUGGAUCUACUUGAAGACUACUGU
((((((((((((...((((((.((((((((((((((((((((((...((....))....)))))))))))))))))))))).))))))...))))))))))))
----------UCCAAUAGGUCGAGCAUGUGC------------------------------------------------------------------------ l=21 a=0 c
--------------------------------------------------------------------------AUAUGCUGGAUCUACUUGAAG-------- l=21 a=0 c*
----------------------------------------------------------------------------------GAUCUACUUGAAGACUACUG- l=20 a=1 ma
---GUAGUUUUCCAAUAGGUCGA-------------------------------------------------------------------------------- l=20 a=0 ma*

---------UUCCAAUAGGUCGAGCgUGUGC------------------------------------------------------------------------ l=22 a=1 
-----------------------------------------------------------------------------UGCUGGAUCUACUUGAAGACa----- l=21 a=1 
----------------------------------------------------------------------------------GAUCUACUUGAAGACUACUG- l=20 a=1 (ma)

mb-01111
ax-1011011
ku-01
ss-110111111100
fn-011
